Resource

Id:hg38/variant_frequencies/gnomAD_v2.1.1_liftover/exomes
Type:allele_score
Summary: ## gnomAD exomes v2.1.1 liftover Original gnomAD exomes v2.1.1 liftover is downloaded on October 19, 2020.
Description:

gnomAD exomes v2.1.1 liftover

Original gnomAD exomes v2.1.1 liftover is downloaded on October 19, 2020.

Labels:
  • reference_genome: hg38/genomes/GRCh38-hg38

Scores

id type default annotation description histogram range
ID str

None

gnomAD v2.1.1 liftover exomes variant ID NO HISTOGRAM NO DOMAIN
AC int

exome_gnomad_v2_1_1_ac

gnomAD v2.1.1 liftover exomes allele count HISTOGRAM FOR AC [0.000, 251463.000]
AN int

exome_gnomad_v2_1_1_an

gnomAD v2.1.1 liftover exomes count of genotyped individuals HISTOGRAM FOR AN [0.000, 251496.000]
AF float

exome_gnomad_v2_1_1_af

gnomAD v2.1.1 liftover exomes allele frequency [0.0, 1.0] HISTOGRAM FOR AF [0.000, 1.000]
AF_percent float

exome_gnomad_v2_1_1_af_percent

gnomAD v2.1.1 liftover exomes allele frequency in % HISTOGRAM FOR AF_percent [0.000, 100.000]
controls_AC int

exome_gnomad_v2_1_1_controls_ac

gnomAD v2.1.1 liftover exomes allele count in control group of individuals HISTOGRAM FOR controls_AC [0.000, 109408.000]
controls_AN int

exome_gnomad_v2_1_1_controls_an

gnomAD v2.1.1 liftover exomes count of genotyped individuals in control group HISTOGRAM FOR controls_AN [0.000, 109408.000]
controls_AF float

None

HISTOGRAM FOR controls_AF [0.000, 1.000]
controls_AF_percent float

exome_gnomad_v2_1_1_controls_af_percent

HISTOGRAM FOR controls_AF_percent [0.000, 100.000]
non_neuro_AC int

exome_gnomad_v2_1_1_non_neuro_ac

HISTOGRAM FOR non_neuro_AC [0.000, 208133.000]
non_neuro_AN int

exome_gnomad_v2_1_1_non_neuro_an

HISTOGRAM FOR non_neuro_AN [0.000, 208136.000]
non_neuro_AF float

None

HISTOGRAM FOR non_neuro_AF [0.000, 1.000]
non_neuro_AF_percent float

exome_gnomad_v2_1_1_non_neuro_af_percent

HISTOGRAM FOR non_neuro_AF_percent [0.000, 100.000]

Files

Filename Size md5
combine_result.sh 473.0 B ea6255336bf53460c5c56ce1e9d8fa92
extract_info.sh 467.0 B 73f562dcc4f646d5566f2e4adc4d5990
genomic_resource.yaml 3.04 KB 7ebcb6020496ea618ece76f1feb9e5e8
gnomad.exomes.r2.1.1.extract.tsv.gz 927.36 MB f83f0702a0de977407f1220e6d40a19b
gnomad.exomes.r2.1.1.extract.tsv.gz.dvc 108.0 B b7ad2843a83eba2420a58ab133d25187
gnomad.exomes.r2.1.1.extract.tsv.gz.tbi 733.7 KB 6713e81d71d66f5eec813e9c709100ac
gnomad.exomes.r2.1.1.extract.tsv.gz.tbi.dvc 109.0 B cf0476673efa52c4b1531e6621c8eccb
hists/exome_gnomad_v2_1_1_af_percent 2.68 KB 6955afb1beee3fa319256ba6640397bd
hists/exome_gnomad_v2_1_1_af_percent.hist.toml 163.0 B c11fd0ed93eea3cf4d3c411d8ec991d4
statistics/