| Id: | hg38/variant_frequencies/gnomAD_v2.1.1_liftover/exomes |
| Type: | allele_score |
| Summary: | Liftover of gnomAD exomes v2.1.1 to hg38 published by the Broad Institute. |
| Description: | gnomAD exomes v2.1.1 liftoverOriginal gnomAD exomes v2.1.1 liftover is downloaded on October 19, 2020. |
| Labels: |
|
| id | type | default annotation | description | histogram | range |
|---|---|---|---|---|---|
| ID | str |
None |
gnomAD v2.1.1 liftover exomes variant ID | NO HISTOGRAM | NO DOMAIN |
| AC | int |
exome_gnomad_v2_1_1_ac |
Alternative allele count in the whole gnomAD exome samples v2.1.1 |
 |
[0.000, 251463.000] |
| AN | int |
exome_gnomad_v2_1_1_an |
Total allele count in the whole gnomAD exome samples v2.1.1 |
 |
[0.000, 251496.000] |
| AF | float |
exome_gnomad_v2_1_1_af |
Alternative allele frequency in the whole gnomAD exome samples v2.1.1 |
 |
[0.000, 1.000] |
| AF_percent | float |
exome_gnomad_v2_1_1_af_percent |
Alternative allele frequency in the whole gnomAD exome samples v2.1.1 as % |
 |
[0.000, 100.000] |
| controls_AC | int |
exome_gnomad_v2_1_1_controls_ac |
Alternative allele count in the controls subset of whole gnomAD exome samples v2.1.1 |
 |
[0.000, 109408.000] |
| controls_AN | int |
exome_gnomad_v2_1_1_controls_an |
gnomAD v2.1.1 liftover exomes count of genotyped individuals in control group |
 |
[0.000, 109408.000] |
| controls_AF | float |
None |
Alternative allele frequency in the controls subset of whole gnomAD exome samples v2.1.1 |
 |
[0.000, 1.000] |
| controls_AF_percent | float |
exome_gnomad_v2_1_1_controls_af_percent |
Alternative allele frequency in the controls subset of whole gnomAD exome samples v2.1.1 as % |
 |
[0.000, 100.000] |
| non_neuro_AC | int |
exome_gnomad_v2_1_1_non_neuro_ac |
Alternative allele count in the non-neuro subset of whole gnomAD exome samples v2.1.1 |
 |
[0.000, 208133.000] |
| non_neuro_AN | int |
exome_gnomad_v2_1_1_non_neuro_an |
Total allele count in the non-neuro subset of whole gnomAD exome samples v2.1.1 |
 |
[0.000, 208136.000] |
| non_neuro_AF | float |
None |
Alternative allele frequency in the non-neuro subset of whole gnomAD exome samples v2.1.1 |
 |
[0.000, 1.000] |
| non_neuro_AF_percent | float |
exome_gnomad_v2_1_1_non_neuro_af_percent |
Alternative allele frequency in the non-neuro subset of whole gnomAD exome samples v2.1.1 as % |
 |
[0.000, 100.000] |
| Filename | Size | md5 |
|---|---|---|
| combine_result.sh | 473.0 B | ea6255336bf53460c5c56ce1e9d8fa92 |
| extract_info.sh | 467.0 B | 73f562dcc4f646d5566f2e4adc4d5990 |
| genomic_resource.yaml | 4.98 KB | 4968daa07d95b211a14b0d7120f9f27b |
| gnomad.exomes.r2.1.1.extract.tsv.gz | 927.36 MB | f83f0702a0de977407f1220e6d40a19b |
| gnomad.exomes.r2.1.1.extract.tsv.gz.dvc | 108.0 B | b7ad2843a83eba2420a58ab133d25187 |
| gnomad.exomes.r2.1.1.extract.tsv.gz.tbi | 733.7 KB | 6713e81d71d66f5eec813e9c709100ac |
| gnomad.exomes.r2.1.1.extract.tsv.gz.tbi.dvc | 109.0 B | cf0476673efa52c4b1531e6621c8eccb |
| hists/exome_gnomad_v2_1_1_af_percent | 2.68 KB | 6955afb1beee3fa319256ba6640397bd |
| hists/exome_gnomad_v2_1_1_af_percent.hist.toml | 163.0 B | c11fd0ed93eea3cf4d3c411d8ec991d4 |
| statistics/ |