Id: | hg38/scores/phyloP7way |
Type: | position_score |
Summary: | phyloP (phylogenetic p-values) conservation score based on the multiple alignments of 6 vertebrate genomes to the human genome. The higher the more conservative. Scores range from from -5.220 to 1.062. |
Description: | phyloP7wayDowloaded long time ago from USCS genome browser by Adriana. Need to be updated. This resource contains conservation scoring by phyloP (phylogenetic p-values) from the PHAST package (http://compgen.bscb.cornell.edu/phast/) for multiple alignments of 6 vertebrate genomes to the human genome. The phastCons data can be found at: http://hgdownload.cse.ucsc.edu/goldenPath/hg38/phastCons7way/ The multiple alignments and methods description are at: http://hgdownload.cse.ucsc.edu/goldenPath/hg38/multiz7way/ For more information about this data, see the track description for the Conservation track: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg38&g=cons7way |
Labels: |
|
id | type | default annotation | description | histogram | range |
---|---|---|---|---|---|
phyloP7way | float |
phylop7way |
The scores is a number that reflects the conservation at a position. | [-5.220, 1.062] |
Filename | Size | md5 |
---|---|---|
genomic_resource.yaml | 1.73 KB | c2e13f366a34160ea005ed58e7a9fc19 |
phyloP7way.bedGraph.gz | 12.54 GB | bab39fe18d78c99578c471adab7fa651 |
phyloP7way.bedGraph.gz.dvc | 97.0 B | 2567629e708c6797c4e87e14cf537458 |
phyloP7way.bedGraph.gz.tbi | 2.95 MB | 926c1ddc40daf487e31973ba15508f57 |
phyloP7way.bedGraph.gz.tbi.dvc | 97.0 B | 3d0e23840aebebee46f1d30fa9bdfd83 |
statistics/ |