Id: | hg38/scores/phyloP20way |
Type: | position_score |
Summary: | phyloP (phylogenetic p-values) conservation score based on the multiple alignments of 19 genome sequences to the human genome. The higher the more conservative. Scores range from from -14.191 to 1.199. |
Description: | phyloP20wayDowloaded long time ago from USCS genome browser by Adriana. Need to be updated. This resource contains conservation scoring by phyloP (phylogenetic p-values) from the PHAST package (http://compgen.cshl.edu/phast/) for multiple alignments of 19 genome sequences to the human genome. The phastCons data can be found at: http://hgdownload.cse.ucsc.edu/goldenPath/hg38/phastCons20way/ The multiple alignments and methods description are at: http://hgdownload.cse.ucsc.edu/goldenPath/hg38/multiz20way/ For more information about this data, see the track description for the Conservation track: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg38&g=cons20way |
Labels: |
|
id | type | default annotation | description | histogram | range |
---|---|---|---|---|---|
phyloP20way | float |
phylop20way |
The scores is a number that reflects the conservation at a position. | [-14.191, 1.199] |
Filename | Size | md5 |
---|---|---|
genomic_resource.yaml | 1.74 KB | 3519cba435df65e49e52e56a95349804 |
phyloP20way.bedGraph.gz | 14.56 GB | f4f496612d4707acc21c6e4a55223b26 |
phyloP20way.bedGraph.gz.dvc | 98.0 B | fa0f838f5b39816bc71438d2883ccb70 |
phyloP20way.bedGraph.gz.tbi | 2.92 MB | 97861b4f4b639539415bc043254cc622 |
phyloP20way.bedGraph.gz.tbi.dvc | 98.0 B | 932b3155326d114b20583dc80692b896 |
statistics/ |