phylop100way
| Id: | hg38/scores/phyloP100way |
| Type: | position_score |
| Summary: | phyloP (phylogenetic p-values) conservation score based on the multiple alignments of 100 vertebrate genomes (including human). |
| Description: | phyloP100wayDowloaded long time ago from USCS genome browser by Adriana. Need to be updated. This resource contains conservation scoring by phyloP (phylogenetic p-values) from the PHAST package (http://compgen.bscb.cornell.edu/phast/) for multiple alignments of 99 vertebrate genomes to the human genome. The phastCons data can be found at: http://hgdownload.cse.ucsc.edu/goldenPath/hg38/phastCons100way/ The multiple alignments and methods description are at: http://hgdownload.cse.ucsc.edu/goldenPath/hg38/multiz100way/ For more information about this data, see the track description for the Conservation track: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg38&g=cons100way |
| Labels: |
|
| id | type | default annotation | description | histogram | range |
|---|---|---|---|---|---|
| phyloP100way | float |
phylop100way |
The scores is a number that reflects the conservation at a position. |
|
[-20.000, 10.003] |
| Filename | Size | md5 |
|---|---|---|
| genomic_resource.yaml | 1.7 KB | 71903f17fbbeac753b6baaac0bf7a3d4 |
| phyloP100way.bedGraph.gz | 16.1 GB | 3f7aac0918d7b99555e2e1c1e1fb2a0c |
| phyloP100way.bedGraph.gz.dvc | 99.0 B | e8f661446a97a0edd392934a6a3077d1 |
| phyloP100way.bedGraph.gz.tbi | 2.74 MB | 506b50d9f329e92c0f840357adc4d003 |
| phyloP100way.bedGraph.gz.tbi.dvc | 99.0 B | fe7bccdbef16b099c8f64e787c958cf4 |
| statistics/ |