Resource

Id:hg38/scores/phastCons20way
Type:position_score
Summary: phastCons20way is a conservation score based on a multiple alignments of 19 vertebrate genomes to the human genome. The larger the score, the more conserved the site. Scores range from 0 to 1.
Description:

phastCons20way

Dowloaded long time ago from USCS genome browser by Adriana. Need to be updated.

This score contains compressed phastCons scores for multiple alignments of 19 genome sequences to the human genome.

The multiple alignments and methods description are at: http://hgdownload.cse.ucsc.edu/goldenPath/hg38/multiz20way/

For more information about this data, see the track description for the Conservation track: http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=tarSyr2&g=cons20way

Labels:
  • reference_genome: hg38/genomes/GRCh38-hg38

Scores

id type default annotation description histogram range
phastCons20way float

phastcons20way

The scores is a number that reflects the conservation at a position. HISTOGRAM FOR phastCons20way [0.000, 1.000]

Files

Filename Size md5
genomic_resource.yaml 1.62 KB 6b9933eb1c44a63c11aa4506b4524e24
phastCons20way.bedGraph.gz 13.6 GB 82161b7030a5b87d20740b88b86533a5
phastCons20way.bedGraph.gz.dvc 101.0 B fba5db49ada0b25360e37c130273a934
phastCons20way.bedGraph.gz.tbi 3.03 MB 3fa7fa8ecc177e6e9d049dfd6f6cb791
phastCons20way.bedGraph.gz.tbi.dvc 101.0 B 51ed838b22cf1fcd51a003be2da300cf
statistics/