Resource

Id: hg38/gene_models/refSeq_v20200330
Type: gene_models
Version: 0
Summary:
Description:
Labels:
  • reference_genome: hg38/genomes/GRCh38-hg38

Configuration

Gene models file:

refSeq_20200330.txt.gz

Format: refseq

Statistics

Chromosome statistics

Transcript number Protein coding transcript number Gene number Protein coding gene number
Global 85,561 64,686 28,281 19,433
chr1 7,438 5,584 2,834 2,018
chr2 5,361 4,089 1,817 1,214
chr3 4,544 3,571 1,562 1,045
chr4 2,848 2,237 1,089 740
chr5 3,425 2,570 1,313 858
chr6 3,826 2,891 1,452 1,013
chr7 3,810 2,844 1,345 895
chr8 2,879 2,176 1,029 659
chr9 2,971 2,240 1,112 755
chrM 1 0 1 0
chrX 2,897 2,341 1,157 849
chrY 458 235 143 65
chr10 3,514 2,701 1,113 716
chr11 4,533 3,673 1,675 1,281
chr12 3,684 2,833 1,391 1,004
chr13 1,414 955 632 320
chr14 2,318 1,693 946 595
chr15 2,505 1,672 1,010 580
chr16 3,011 2,230 1,145 824
chr17 3,808 2,970 1,575 1,149
chr18 1,207 929 434 267
chr19 4,317 3,430 1,791 1,398
chr20 1,889 1,414 781 528
chr21 1,036 695 414 236
chr22 1,602 1,230 645 433
chrUn_GL000195v1 5 4 1 1
chrUn_GL000213v1 4 1 4 1
chrUn_GL000218v1 3 0 2 0
chrUn_GL000219v1 1 0 1 0
chrUn_GL000220v1 37 0 21 0
chrUn_GL000224v1 1 0 1 0
chrUn_KI270741v1 2 0 1 0
chrUn_KI270753v1 1 0 1 0
chr1_GL383518v1_alt 7 5 4 3
chr1_GL383519v1_alt 26 24 8 7
chr1_GL383520v2_alt 10 9 2 2
chr1_KI270759v1_alt 1 1 1 1
chr1_KI270761v1_alt 7 7 7 7
chr1_KI270762v1_alt 19 15 9 7
chr1_KI270763v1_alt 15 13 5 3
chr1_KI270765v1_alt 6 3 6 3
chr1_KI270766v1_alt 27 22 22 19
chr1_KI270892v1_alt 7 7 7 7
chr1_KN196472v1_fix 2 1 2 1
chr1_KN196473v1_fix 4 3 2 1
chr1_KN196474v1_fix 6 2 4 1
chr1_KN538360v1_fix 10 9 3 2
chr1_KN538361v1_fix 8 6 7 5
chr1_KQ031383v1_fix 30 25 23 20
chr1_KQ458383v1_alt 19 15 9 6
chr1_KQ458384v1_alt 9 9 3 3
chr1_KQ983255v1_alt 28 23 22 19
chr1_KV880763v1_alt 6 5 4 3
chr1_KZ208904v1_alt 8 7 4 4
chr1_KZ208906v1_fix 173 9 26 7
chr2_GL383521v1_alt 1 0 1 0
chr2_GL383522v1_alt 8 8 4 4
chr2_GL582966v2_alt 2 1 1 1
chr2_KI270767v1_alt 7 0 5 0
chr2_KI270768v1_alt 8 3 2 1
chr2_KI270769v1_alt 4 4 2 2
chr2_KI270770v1_alt 2 0 1 0
chr2_KI270773v1_alt 1 1 1 1
chr2_KI270774v1_alt 6 6 1 1
chr2_KI270776v1_alt 12 8 6 4
chr2_KI270893v1_alt 7 0 5 0
chr2_KN538362v1_fix 1 0 1 0
chr2_KN538363v1_fix 11 9 5 3
chr2_KQ983256v1_alt 22 18 9 5
chr2_KZ208908v1_alt 3 2 3 2
chr3_GL383526v1_alt 4 1 3 1
chr3_JH636055v2_alt 15 5 1 1
chr3_KI270777v1_alt 5 5 2 2
chr3_KI270779v1_alt 13 8 6 2
chr3_KI270780v1_alt 4 0 3 0
chr3_KI270781v1_alt 2 0 1 0
chr3_KI270782v1_alt 4 3 2 1
chr3_KI270783v1_alt 1 0 1 0
chr3_KI270784v1_alt 2 0 2 0
chr3_KI270895v1_alt 13 8 6 2
chr3_KI270924v1_alt 13 8 6 2
chr3_KI270934v1_alt 13 8 6 2
chr3_KI270935v1_alt 13 8 6 2
chr3_KI270936v1_alt 13 8 6 2
chr3_KI270937v1_alt 13 8 6 2
chr3_KN196475v1_fix 48 33 16 13
chr3_KN538364v1_fix 2 1 2 1
chr3_KQ031385v1_fix 13 12 2 2
chr3_KV766192v1_fix 3 2 2 1
chr3_KZ208909v1_alt 1 0 1 0
chr3_KZ559101v1_alt 2 0 2 0
chr3_KZ559102v1_alt 1 0 1 0
chr3_KZ559103v1_alt 2 1 2 1
chr3_KZ559104v1_fix 1 0 1 0
chr3_KZ559105v1_alt 9 6 4 3
chr4_GL000257v2_alt 14 13 6 6
chr4_GL383527v1_alt 3 3 3 3
chr4_KI270786v1_alt 3 0 2 0
chr4_KI270789v1_alt 1 0 1 0
chr4_KI270790v1_alt 1 0 1 0
chr4_KI270896v1_alt 9 5 5 3
chr4_KI270925v1_alt 4 0 3 0
chr4_KQ090013v1_alt 8 6 3 1
chr4_KQ090015v1_alt 8 6 6 4
chr4_KQ983257v1_fix 12 8 5 3
chr4_KQ983258v1_alt 12 8 5 3
chr4_KV766193v1_alt 2 2 1 1
chr5_GL339449v2_alt 121 85 29 16
chr5_GL949742v1_alt 2 0 2 0
chr5_KI270791v1_alt 4 3 4 3
chr5_KI270792v1_alt 6 3 4 2
chr5_KI270793v1_alt 2 0 2 0
chr5_KI270794v1_alt 5 5 3 3
chr5_KI270795v1_alt 3 1 3 1
chr5_KI270796v1_alt 1 0 1 0
chr5_KI270897v1_alt 71 50 18 9
chr5_KI270898v1_alt 3 1 3 1
chr5_KV575243v1_alt 15 0 7 0
chr5_KV575244v1_fix 73 64 17 12
chr6_GL000250v2_alt 258 177 118 81
chr6_GL000251v2_alt 516 370 242 166
chr6_GL000252v2_alt 472 340 219 151
chr6_GL000253v2_alt 420 302 187 129
chr6_GL000254v2_alt 453 340 212 153
chr6_GL000255v2_alt 494 356 225 155
chr6_GL000256v2_alt 432 311 198 135
chr6_KI270758v1_alt 4 2 4 2
chr6_KI270797v1_alt 8 5 4 2
chr6_KI270798v1_alt 7 5 4 2
chr6_KI270799v1_alt 1 0 1 0
chr6_KI270800v1_alt 1 0 1 0
chr6_KI270801v1_alt 11 10 3 2
chr6_KI270802v1_alt 1 0 1 0
chr6_KQ090016v1_fix 5 5 2 2
chr6_KV766194v1_fix 6 6 3 3
chr6_KZ208911v1_fix 13 9 4 4
chr7_GL383534v2_alt 11 9 5 4
chr7_KI270803v1_alt 25 17 18 13
chr7_KI270804v1_alt 5 1 4 1
chr7_KI270806v1_alt 11 8 4 2
chr7_KI270808v1_alt 1 1 1 1
chr7_KI270809v1_alt 12 11 5 4
chr7_KI270899v1_alt 5 1 4 1
chr7_KQ031388v1_fix 2 2 1 1
chr7_KV880764v1_fix 1 1 1 1
chr7_KV880765v1_fix 43 22 7 7
chr7_KZ208912v1_fix 33 27 18 14
chr7_KZ208913v1_alt 51 36 21 16
chr8_KI270810v1_alt 1 0 1 0
chr8_KI270811v1_alt 2 0 2 0
chr8_KI270812v1_alt 2 0 2 0
chr8_KI270813v1_alt 43 31 31 23
chr8_KI270814v1_alt 3 0 3 0
chr8_KI270815v1_alt 1 1 1 1
chr8_KI270816v1_alt 62 50 22 15
chr8_KI270817v1_alt 11 6 6 3
chr8_KI270818v1_alt 2 0 2 0
chr8_KI270819v1_alt 8 4 4 3
chr8_KI270820v1_alt 1 0 1 0
chr8_KI270821v1_alt 13 5 8 3
chr8_KI270822v1_alt 15 9 6 4
chr8_KI270900v1_alt 2 1 2 1
chr8_KI270926v1_alt 6 2 5 2
chr8_KZ208914v1_fix 31 24 16 11
chr8_KZ208915v1_fix 231 147 122 67
chr8_KZ559107v1_alt 1 1 1 1
chr9_GL383540v1_alt 1 1 1 1
chr9_GL383541v1_alt 4 2 2 1
chr9_KI270823v1_alt 5 5 2 2
chr9_KN196479v1_fix 44 33 17 13
chrX_KI270880v1_alt 3 1 2 1
chrX_KI270881v1_alt 4 4 1 1
chrX_KI270913v1_alt 1 1 1 1
chrY_KZ208924v1_fix 1 0 1 0
chr10_GL383545v1_alt 2 1 2 1
chr10_GL383546v1_alt 10 9 4 3
chr10_KI270825v1_alt 2 1 2 1
chr10_KN196480v1_fix 19 17 4 2
chr10_KQ090020v1_alt 1 0 1 0
chr10_KQ090021v1_fix 5 4 3 2
chr11_JH159136v1_alt 10 10 10 10
chr11_JH159137v1_alt 4 3 4 3
chr11_KI270827v1_alt 1 0 1 0
chr11_KI270829v1_alt 7 5 7 5
chr11_KI270830v1_alt 13 9 10 7
chr11_KI270831v1_alt 37 32 11 7
chr11_KI270832v1_alt 42 36 16 12
chr11_KI270902v1_alt 5 3 2 2
chr11_KI270903v1_alt 13 9 11 8
chr11_KI270927v1_alt 7 4 4 3
chr11_KN196481v1_fix 23 19 8 7
chr11_KN538368v1_alt 7 5 7 5
chr11_KQ759759v1_fix 4 3 4 3
chr11_KV766195v1_fix 3 2 2 2
chr11_KZ559108v1_fix 1 0 1 0
chr11_KZ559109v1_fix 30 27 9 8
chr11_KZ559110v1_alt 4 4 2 2
chr11_KZ559111v1_alt 6 5 4 3
chr12_GL383550v2_alt 6 4 3 1
chr12_GL383551v1_alt 1 0 1 0
chr12_GL383553v2_alt 5 4 3 2
chr12_GL877875v1_alt 6 2 5 1
chr12_GL877876v1_alt 23 21 20 19
chr12_KI270833v1_alt 2 2 1 1
chr12_KI270834v1_alt 8 8 2 2
chr12_KI270835v1_alt 5 3 3 1
chr12_KI270837v1_alt 3 2 1 1
chr12_KI270904v1_alt 29 26 23 22
chr12_KN538369v1_fix 17 12 10 5
chr12_KN538370v1_fix 4 3 3 2
chr12_KZ208916v1_fix 41 33 12 5
chr12_KZ208917v1_fix 4 3 3 2
chr13_KI270838v1_alt 7 3 6 2
chr13_KI270840v1_alt 2 0 2 0
chr13_KI270842v1_alt 2 1 2 1
chr13_KN538371v1_fix 4 4 2 2
chr13_KN538372v1_fix 4 3 4 3
chr13_KN538373v1_fix 1 0 1 0
chr14_KI270844v1_alt 5 5 2 2
chr14_KI270845v1_alt 5 5 2 2
chr14_KI270846v1_alt 17 0 13 0
chr14_KI270847v1_alt 75 64 27 23
chr14_KZ208919v1_alt 1 1 1 1
chr14_KZ208920v1_fix 114 95 36 34
chr15_GL383554v1_alt 29 16 16 9
chr15_GL383555v2_alt 2 1 2 1
chr15_KI270848v1_alt 38 30 17 11
chr15_KI270849v1_alt 10 6 5 2
chr15_KI270850v1_alt 36 22 10 4
chr15_KI270851v1_alt 24 16 21 14
chr15_KI270852v1_alt 24 6 19 6
chr15_KI270905v1_alt 148 90 69 38
chr15_KI270906v1_alt 18 11 15 9
chr15_KN538374v1_fix 156 91 72 39
chr15_KQ031389v1_alt 53 30 31 18
chr16_GL383556v1_alt 6 6 2 2
chr16_GL383557v1_alt 2 2 1 1
chr16_KI270853v1_alt 137 62 56 23
chr16_KI270854v1_alt 5 4 3 2
chr16_KI270855v1_alt 33 31 10 9
chr16_KI270856v1_alt 3 1 3 1
chr16_KQ090026v1_alt 8 6 4 3
chr16_KQ090027v1_alt 12 11 3 3
chr16_KV880768v1_fix 70 46 34 20
chr16_KZ208921v1_alt 21 18 5 4
chr16_KZ559113v1_fix 2 1 2 1
chr17_GL000258v2_alt 70 49 23 14
chr17_GL383563v3_alt 10 6 5 3
chr17_GL383564v2_alt 9 8 8 7
chr17_GL383566v1_alt 1 0 1 0
chr17_JH159146v1_alt 26 25 22 22
chr17_JH159147v1_alt 9 9 7 7
chr17_JH159148v1_alt 8 8 6 6
chr17_KI270857v1_alt 213 175 72 57
chr17_KI270860v1_alt 8 6 3 3
chr17_KI270861v1_alt 24 17 9 7
chr17_KI270862v1_alt 14 12 6 5
chr17_KI270907v1_alt 5 2 2 1
chr17_KI270908v1_alt 71 53 24 15
chr17_KI270909v1_alt 64 59 19 19
chr17_KI270910v1_alt 9 8 3 2
chr17_KV575245v1_fix 25 23 14 13
chr17_KV766196v1_fix 7 6 4 3
chr17_KV766197v1_alt 1 0 1 0
chr17_KV766198v1_alt 20 15 13 8
chr18_GL383567v1_alt 2 2 1 1
chr18_GL383571v1_alt 1 1 1 1
chr18_GL383572v1_alt 1 1 1 1
chr18_KI270863v1_alt 6 4 3 1
chr18_KI270911v1_alt 1 1 1 1
chr18_KQ090028v1_fix 3 2 2 1
chr18_KQ458385v1_alt 1 1 1 1
chr18_KZ559115v1_fix 1 0 1 0
chr19_GL000209v2_alt 39 33 20 18
chr19_GL383573v1_alt 6 5 2 2
chr19_GL383574v1_alt 2 2 1 1
chr19_GL383575v2_alt 14 12 4 2
chr19_GL383576v1_alt 1 1 1 1
chr19_GL949746v1_alt 152 122 49 43
chr19_GL949747v2_alt 131 114 43 41
chr19_GL949748v2_alt 92 80 33 32
chr19_GL949749v2_alt 88 76 32 31
chr19_GL949750v2_alt 82 72 25 25
chr19_GL949751v2_alt 93 79 33 32
chr19_GL949752v1_alt 175 144 56 50
chr19_GL949753v2_alt 132 112 44 40
chr19_KI270865v1_alt 2 2 1 1
chr19_KI270866v1_alt 2 2 2 2
chr19_KI270867v1_alt 12 10 5 3
chr19_KI270868v1_alt 6 6 5 5
chr19_KI270882v1_alt 41 35 20 18
chr19_KI270883v1_alt 37 31 19 17
chr19_KI270884v1_alt 33 30 19 17
chr19_KI270885v1_alt 39 32 19 17
chr19_KI270886v1_alt 39 33 20 18
chr19_KI270887v1_alt 38 31 20 18
chr19_KI270888v1_alt 33 30 19 17
chr19_KI270889v1_alt 36 31 19 17
chr19_KI270890v1_alt 38 32 20 18
chr19_KI270891v1_alt 36 31 19 17
chr19_KI270914v1_alt 38 32 19 17
chr19_KI270915v1_alt 38 32 19 17
chr19_KI270916v1_alt 39 33 20 18
chr19_KI270917v1_alt 48 44 20 19
chr19_KI270918v1_alt 31 25 16 14
chr19_KI270919v1_alt 39 31 19 17
chr19_KI270920v1_alt 50 43 20 19
chr19_KI270921v1_alt 55 49 22 20
chr19_KI270922v1_alt 49 44 20 19
chr19_KI270923v1_alt 46 43 21 19
chr19_KI270929v1_alt 51 44 20 18
chr19_KI270930v1_alt 39 31 19 17
chr19_KI270931v1_alt 37 31 19 17
chr19_KI270932v1_alt 39 33 20 18
chr19_KI270933v1_alt 38 30 19 16
chr19_KI270938v1_alt 185 153 59 53
chr19_KN196484v1_fix 16 15 9 8
chr19_KQ458386v1_fix 36 31 17 16
chr19_KV575246v1_alt 37 31 19 17
chr19_KV575247v1_alt 38 31 19 17
chr19_KV575248v1_alt 38 31 19 17
chr19_KV575249v1_alt 48 42 21 19
chr19_KV575250v1_alt 50 45 22 20
chr19_KV575251v1_alt 38 31 19 17
chr19_KV575252v1_alt 37 31 19 17
chr19_KV575253v1_alt 39 30 19 17
chr19_KV575254v1_alt 24 19 13 11
chr19_KV575255v1_alt 37 31 19 17
chr19_KV575256v1_alt 44 38 20 18
chr19_KV575257v1_alt 21 16 11 9
chr19_KV575258v1_alt 42 38 17 16
chr19_KV575259v1_alt 38 31 19 17
chr19_KV575260v1_alt 32 30 19 17
chr20_KI270869v1_alt 5 4 3 2
chr20_KI270870v1_alt 10 10 4 4
chr20_KI270871v1_alt 1 1 1 1
chr21_GL383579v2_alt 1 0 1 0
chr21_GL383580v2_alt 5 3 2 1
chr21_GL383581v2_alt 10 9 4 4
chr21_KI270872v1_alt 11 10 5 4
chr21_KI270873v1_alt 3 2 2 1
chr22_GL383582v2_alt 12 6 7 5
chr22_GL383583v2_alt 2 1 2 1
chr22_KB663609v1_alt 14 6 7 5
chr22_KI270875v1_alt 16 13 4 3
chr22_KI270876v1_alt 19 19 2 2
chr22_KI270877v1_alt 5 4 3 2
chr22_KI270878v1_alt 4 0 4 0
chr22_KI270879v1_alt 58 45 17 14
chr22_KI270928v1_alt 19 9 8 6
chr22_KN196485v1_alt 8 4 5 3
chr22_KN196486v1_alt 14 6 5 3
chr22_KQ458387v1_alt 13 6 5 3
chr22_KQ458388v1_alt 17 7 5 3
chr22_KQ759761v1_alt 14 6 5 3
chr22_KQ759762v1_fix 3 2 3 2
chr1_KI270713v1_random 7 0 7 0
chr1_KI270714v1_random 1 0 1 0
chr4_GL000008v2_random 1 0 1 0
chr11_KI270721v1_random 8 2 6 2
chr14_GL000194v1_random 4 0 1 0
chr15_KI270727v1_random 5 1 5 1
chr16_KI270728v1_random 27 7 10 7
chr17_GL000205v2_random 1 0 1 0
chr22_KI270731v1_random 3 0 2 0
chr22_KI270733v1_random 36 0 24 0
chr22_KI270734v1_random 8 6 6 4

Files

Filename Size md5
genomic_resource.yaml 251.0 B a7e13b4956281006202e3a4cd5264a60
refSeq_20200330.txt.gz 4.14 MB c4a1ef73fb7e4a29f81c1578f29532c3
refSeq_20200330.txt.gz.dvc 93.0 B 2c9f21bd6b5b8bd4d6db185206a5808b
statistics/