Resource

Id: hg19/variant_frequencies/gnomAD_v2.1.1/exomes
Type: allele_score
Version: 0
Summary:
Description:
Labels:
  • reference_genome: hg19/genomes/GATK_ResourceBundle_5777_b37_phiX174

Scores

ID Type Default annotation Description Histogram Range
ID str

None
variant ID
 NO HISTOGRAM NO DOMAIN
AC int

exome_gnomad_ac
Alternative allele count in the whole gnomAD exome samples v2.1.1
 HISTOGRAM FOR AC [0.000, 251490.000]
AN int

exome_gnomad_an
Total allele count in the whole gnomAD exome samples v2.1.1
 HISTOGRAM FOR AN [0.000, 251496.000]
AF float

exome_gnomad_af
Alternative allele frequency in the whole gnomAD exome samples v2.1.1
 HISTOGRAM FOR AF [0.000, 1.000]
AF_percent float

exome_gnomad_af_percent
Alternative allele frequency in the whole gnomAD exome samples v2.1.1 as percent
 HISTOGRAM FOR AF_percent [0.000, 100.000]
controls_AC int

exome_gnomad_controls_ac
Alternative allele count in the controls subset of whole gnomAD exome samples v2.1.1
 HISTOGRAM FOR controls_AC [0.000, 109408.000]
controls_AN int

exome_gnomad_controls_an
gnomAD v2.1.1 liftover exomes count of genotyped individuals in control group
 HISTOGRAM FOR controls_AN [0.000, 109408.000]
controls_AF float

exome_gnomad_controls_af
Alternative allele frequency in the controls subset of whole gnomAD exome samples v2.1.1
 HISTOGRAM FOR controls_AF [0.000, 1.000]
controls_AF_percent float

exome_gnomad_controls_af_percent
Alternative allele frequency in the controls subset of whole gnomAD exome samples v2.1.1 as %
 HISTOGRAM FOR controls_AF_percent [0.000, 100.000]
non_neuro_AC int

exome_gnomad_non_neuro_ac
Alternative allele count in the non-neuro subset of whole gnomAD exome samples v2.1.1
 HISTOGRAM FOR non_neuro_AC [0.000, 208133.000]
non_neuro_AN int

exome_gnomad_non_neuro_an
Total allele count in the non-neuro subset of whole gnomAD exome samples v2.1.1
 HISTOGRAM FOR non_neuro_AN [0.000, 208136.000]
non_neuro_AF float

exome_gnomad_non_neuro_af
Alternative allele frequency in the non-neuro subset of whole gnomAD exome samples v2.1.1
 HISTOGRAM FOR non_neuro_AF [0.000, 1.000]
non_neuro_AF_percent float

exome_gnomad_non_neuro_af_percent
Alternative allele frequency in the non-neuro subset of whole gnomAD exome samples v2.1.1 as %
 HISTOGRAM FOR non_neuro_AF_percent [0.000, 100.000]

Files

Filename Size md5
README.txt 1.59 KB 141f34e4f4dc70971dab151e710aec13
genomic_resource.yaml 5.06 KB 3555727dd324cd3b5745deb243d9fea9
gnomad.exomes.r2.1.1.sites-exported.txt.gz 958.54 MB cb1421eb09c7d88dc517d7421d7b3242
gnomad.exomes.r2.1.1.sites-exported.txt.gz.dvc 116.0 B 9c9af3b75f348de0412ca6121bae2ea4
gnomad.exomes.r2.1.1.sites-exported.txt.gz.tbi 737.31 KB 2dd456d16db7056e6a87c282faa4cd14
gnomad.exomes.r2.1.1.sites-exported.txt.gz.tbi.dvc 116.0 B 309e302a836223db792b198fd2228b61
statistics/