Resource

Id:hg19/scores/FitCons2_E070
Type:position_score
Summary: FitCons2 score computed for the Brain Germinal Matrix (E070) tissue.
Description:

FitCons2 is a new framework that simultaneously clusters genomic sites by epigenomic features and evaluates the strength of natural selection on these sites. FitCons2 is used to generate fitness-consequence maps of probabilities that mutations at individual nucleotides have fitness consequences for 115 human cell types. The method is described in https://pubmed.ncbi.nlm.nih.gov/30559490.

This resource contains the fitness-consequence map computed by FitCons2 for the Brain Germinal Matrix (E070) tissue.

Labels:
  • reference_genome: hg19/genomes/GATK_ResourceBundle_5777_b37_phiX174

Scores

id type default annotation description histogram range
FitCons2_E070 float

fitcons2_e070

The scores is the probability for a mutation to have a fitenss consequence. HISTOGRAM FOR FitCons2_E070 [0.005, 0.934]

Files

Filename Size md5
FitCons2_E070_sco.bedGraph.gz 261.79 MB a9bcbfbb0c0feb1bd2134b069febdc65
FitCons2_E070_sco.bedGraph.gz.dvc 102.0 B c678c8cd300fcff46636c7aa2a442841
FitCons2_E070_sco.bedGraph.gz.tbi 524.62 KB 031a720f7fa825f3482a659e1079305c
FitCons2_E070_sco.bedGraph.gz.tbi.dvc 103.0 B 8b71d0f93c39b2852344767155d86254
genomic_resource.yaml 1.42 KB b41c05e9e9fc8a5f545bf3e420b1d289
statistics/