Resource

Id:hg19/scores/FitCons2_E035
Type:position_score
Summary: FitCons2 score computed for the Primary haematopoietic stem cells (HSCs) (E035).
Description:

FitCons2 is a new framework that simultaneously clusters genomic sites by epigenomic features and evaluates the strength of natural selection on these sites. FitCons2 is used to generate fitness-consequence maps of probabilities that mutations at individual nucleotides have fitness consequences for 115 human cell types. The method is described in https://pubmed.ncbi.nlm.nih.gov/30559490.

This resource contains the fitness-consequence map computed by FitCons2 for the Primary haematopoietic stem cells (HSCs) (E035).

Labels:
  • reference_genome: hg19/genomes/GATK_ResourceBundle_5777_b37_phiX174

Scores

id type default annotation description histogram range
FitCons2_E035 float

fitcons2_e035

The scores is the probability for a mutation to have a fitenss consequence. HISTOGRAM FOR FitCons2_E035 [0.005, 0.934]

Files

Filename Size md5
FitCons2_E035_sco.bedGraph.gz 290.98 MB 217d45b765e67454b31f530acf9054e5
FitCons2_E035_sco.bedGraph.gz.dvc 102.0 B f6a45dc9f7a555a4bff9e76d5481d931
FitCons2_E035_sco.bedGraph.gz.tbi 532.39 KB 074b5924b7ba69c5a0bde0ae83a975fb
FitCons2_E035_sco.bedGraph.gz.tbi.dvc 103.0 B 814d2b513cadbd16cf07d364586be917
genomic_resource.yaml 1.42 KB cd18c6446e620c56fc72d868c1a5d23a
statistics/