Resource

Id:hg19/scores/CADD
Type:np_score
Summary: ## CADD Downloaded from https://cadd.gs.washington.edu/download ; Higher values of raw scores have relative meaning that a variant is more likely to be simulated (or "not observed") and therefore more likely to have deleterious effects. Scaled scores are PHRED-like (-10*log10(rank/total)) scaled C-score ranking a variant relative to all possible substitutions of the human genome (8.6x10^9).
Description:

CADD

Downloaded from https://cadd.gs.washington.edu/download ;

Higher values of raw scores have relative meaning that a variant is more likely to be simulated (or "not observed") and therefore more likely to have deleterious effects.

Scaled scores are PHRED-like (-10*log10(rank/total)) scaled C-score ranking a variant relative to all possible substitutions of the human genome (8.6x10^9).

Labels:
  • reference_genome: hg19/genomes/GATK_ResourceBundle_5777_b37_phiX174

Scores

id type default annotation description histogram range
cadd_raw float

cadd_raw

CADD raw HISTOGRAM FOR cadd_raw [-7.535, 35.789]
cadd_phred float

cadd_phred

CADD phred HISTOGRAM FOR cadd_phred [0.000, 99.000]

Files

Filename Size md5
CADD.bedgraph.gz 79.37 GB 3a766a8e17649754371fdcafd4d1438d
CADD.bedgraph.gz.dvc 91.0 B 61b8c446d51719165655dd42b1ee5536
CADD.bedgraph.gz.tbi 2.6 MB 757558e9cc3731ea7ce629ff35ebb7b7
CADD.bedgraph.gz.tbi.dvc 91.0 B 89e4400ddd3349702b7654ff5ab5935c
genomic_resource.yaml 1.51 KB e050d8fd69476012c535514af8edacfc
statistics/